As the air turns crisp and leaves begin to fall, I can’t help but crave the warm comforts of fall baking. There’s something truly special about the combination of pumpkin and cream cheese in these Pumpkin Cream Cheese Muffins that instantly lifts my spirits. Not only are they soft, moist, and incredibly fluffy, but they also whip up quickly using simple pantry ingredients – perfect for those cozy mornings when time is tight. Plus, they outshine the café versions and can easily be stored for later, making them a freezer-friendly treat for sweet snacking anytime. Curious about how to make these delicious muffins that will impress friends and family alike? Let’s dive into the recipe!

Why Are These Muffins So Irresistible?
Soft, Moist Texture: Each bite is delightfully fluffy, bursting with pumpkin goodness and a gooey cream cheese center that will keep you coming back for more.
Simple Ingredients: Made with everyday pantry staples, these muffins are as hassle-free as they are delicious. You might even want to try your hand at adapting this recipe with other favorites like Chocolate Chip Cookies for added variety!
Perfectly Spiced: The warm flavors of pumpkin pie spice and cinnamon make them a cozy treat that screams fall, perfect for breakfast or an afternoon snack.
Freezer-Friendly: Bake a batch and store extras for later—these muffins freeze beautifully, ensuring a sweet treat is always within reach!
Crowd-Pleasing Appeal: Whether serving to guests or indulging solo, these muffins are sure to impress everyone at your table. Feel free to explore other recipes like Pumpkin Cheesecake Truffles for more pumpkin-inspired delights!
Pumpkin Cream Cheese Muffin Ingredients
For the Muffin Batter
- Pumpkin Puree – Provides moistness and flavor; using canned ensures consistent results.
- Light Brown Sugar – Adds sweetness and moisture; can substitute with white sugar if needed.
- Granulated Sugar – Increases overall sweetness; adjust to your taste preference.
- Eggs – Act as a binding agent; ensure they’re at room temperature for better incorporation.
- Sunflower Oil – Contributes moisture; can be replaced with any neutral oil (like canola).
- Vanilla Extract – Enhances the flavor; opt for pure extract for best results.
- All-Purpose Flour – Forms the base structure; gluten-free flour works as a substitute.
- Pumpkin Pie Spice – Adds warm spiced flavor; use a homemade mix if desired.
- Cinnamon – Complements pumpkin flavors; optional but highly recommended.
- Baking Powder & Baking Soda – Provide leavening; ensure freshness for optimal fluffiness.
- Salt – Balances flavors and is essential in baking.
- Whole Milk – Adds moisture; any milk or dairy alternative can be used.
For the Cream Cheese Filling
- Cream Cheese – Adds a rich, creamy filling; ensure it’s softened for easy mixing.
- Granulated Sugar (for filling) – Sweetens the cream cheese mixture.
- All-Purpose Flour (for filling) – Helps stabilize the filling consistency.
- Vanilla Extract (for filling) – Enhances the filling flavor.
- Whole Milk (for filling) – Adjusts the texture of the cream cheese.
Make these Pumpkin Cream Cheese Muffins a delightful addition to your fall baking repertoire!
Step‑by‑Step Instructions for Pumpkin Cream Cheese Muffins
Step 1: Preheat the Oven
Begin by preheating your oven to 425°F (220°C). While the oven heats up, take a moment to line a standard muffin pan with paper liners to ensure easy removal later. This will prepare your baking setup for the delicious Pumpkin Cream Cheese Muffins you’re about to create.
Step 2: Make Pumpkin Batter
In a large mixing bowl, combine the pumpkin puree with both light brown and granulated sugars, whisking until the mixture is smooth and well blended. Add in the room-temperature eggs, sunflower oil, and vanilla extract, stirring until fully incorporated. This creamy mixture will serve as the base of your muffins, so make sure it looks even and vibrant.
Step 3: Mix Dry Ingredients
In a separate bowl, whisk together the all-purpose flour, pumpkin pie spice, cinnamon, baking powder, baking soda, and salt until well incorporated. This dry mixture adds the spiced goodness and structure your Pumpkin Cream Cheese Muffins need. Take a moment to ensure there are no lumps, leading to a light and fluffy muffin.
Step 4: Combine the Mixtures
Gently fold the dry ingredients into the wet mixture. As you do this, add the whole milk incrementally until just combined—be careful not to overmix, as this can affect the texture. Once incorporated, let the batter rest for about 30 minutes. This step enhances the muffin’s softness and gives it a lovely texture.
Step 5: Prepare Cream Cheese Filling
In a medium-sized bowl, beat together the softened cream cheese, granulated sugar, flour, vanilla extract, and a splash of whole milk until smooth. This creamy filling should be thick yet spreadable; adjust with more milk if necessary. This delightful blend will create the rich center of your muffins that contrasts perfectly with the spiced pumpkin batter.
Step 6: Assemble Muffins
Scoop some pumpkin batter into each muffin liner until they are about two-thirds full. Using a piping bag or a spoon, carefully add a dollop of the cream cheese filling on top of each muffin. Optionally, sprinkle pumpkin seeds on top for added texture and a lovely finish. This layering ensures every bite is a delightful surprise.
Step 7: Bake the Muffins
Place the muffin pan in your preheated oven and bake at 425°F (220°C) for the first 5 minutes. Then, reduce the temperature to 350°F (175°C) and continue baking for an additional 12-15 minutes. The muffins are done when they spring back lightly when touched and a toothpick inserted in the center comes out clean, showcasing their fluffy texture.
Step 8: Cool and Enjoy
Once baked, remove the muffins from the oven and let them cool in the pan for about 5 minutes. Afterward, transfer them to a wire rack to cool completely. This cooling step prevents sogginess, allowing your Pumpkin Cream Cheese Muffins to reach their perfect serving condition, ready for you to share and enjoy!

What to Serve with Pumpkin Cream Cheese Muffins
As you savor the sweet warmth of these delightful muffins, consider pairing them with comforting accompaniments that elevate the experience.
- Creamy Mashed Potatoes: The buttery, fluffy texture contrasts beautifully with the muffins, offering a savory bite to balance the sweetness.
- Spiced Apple Cider: Enjoy this warm beverage on chilly mornings; its cinnamon undertones harmonize with the pumpkin flavors, creating a cozy atmosphere.
- Whipped Maple Butter: Slather this on your muffins for an extra layer of sweetness and richness, enhancing the cream cheese filling and warming your palate.
- Crumbly Sausage Breakfast Casserole: A savory side dish that complements the muffins with its hearty, protein-packed goodness, perfect for a brunch gathering.
- Fresh Fruit Salad: The vibrant colors and tartness of seasonal fruits add a refreshing contrast, brightening your plate and palate after the sweet muffins.
- Chai Latte: The warm spices in this tea echo the flavors of the muffins while providing a delightful sipping experience alongside them.
- Roasted Autumn Vegetables: Create a contrast of textures and flavors with caramelized seasonal veggies that add richness to your meal.
- Vanilla Ice Cream: For a sweet treat, serve a warm muffin alongside a scoop of ice cream, as the creaminess complements the tender texture nicely.
- Maple Pecan Coffee: A cup of this rich coffee adds warmth and nutty depth, enhancing the overall sweet experience of your muffins.
Expert Tips for Pumpkin Cream Cheese Muffins
• Resting Time: Allow the batter to rest for 30 minutes. This crucial step enhances texture, ensuring your Pumpkin Cream Cheese Muffins are softer and fluffier.
• Even Distribution: Use an ice cream scoop to measure out the batter for consistent muffin sizes, which helps with even baking and presentation.
• Correct Cream Cheese Handling: Pipe the cream cheese filling gently on top to prevent it from sinking into the batter. A light touch is all you need!
• Mixing Caution: Avoid overmixing the batter, as this can lead to dense muffins. Just mix until everything is incorporated for that delightful fluffiness.
• Fresh Ingredients: Always check the freshness of your baking powder and baking soda. Fresh leavening agents are key for your muffins to rise beautifully!
Make Ahead Options
These Pumpkin Cream Cheese Muffins are perfect for meal prep, allowing you to savor their deliciousness without the last-minute rush! You can prepare the muffin batter and the cream cheese filling up to 24 hours in advance. Simply combine the ingredients as directed, then refrigerate the batter in an airtight container and the filling in a separate container to maintain their quality. When you’re ready to bake, let them sit at room temperature for about 30 minutes before assembling and baking as instructed. This prep-ahead method not only saves you time but ensures your muffins are just as fluffy and moist as if made fresh, making your busy mornings a breeze!
Pumpkin Cream Cheese Muffins Variations & Substitutions
Feel free to explore exciting twists and substitutions for these delightful muffins that will tickle your taste buds!
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Dairy-Free: Substitute cream cheese with a vegan cream cheese alternative and use dairy-free milk for a lactose-free option.
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Gluten-Free: Use a gluten-free all-purpose flour blend instead of regular flour for a delicious gluten-free treat.
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Less Sugar: Reduce the granulated sugar by half to cut down on sweetness and enjoy a more understated flavor.
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Nutty Add-Ins: Toss in some chopped pecans or walnuts for a delightful crunch throughout your muffins, adding heartiness to each bite.
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Spice it Up: Experiment with additional spices like ginger or cloves to enhance the warm, cozy flavors of fall in your muffins.
For an indulgent twist, consider doubling the cream cheese filling for an even richer taste that rivals the best cafés. It’s a delightful surprise that everyone will love!
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Try Chocolate: Stir in chocolate chips to the batter, creating a beautiful partnership of chocolate and pumpkin flavors that will sweeten your day!
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Fruit Boost: Mix in some dried cranberries or raisins for a burst of chewy sweetness that adds a fruity punch to your muffins.
These suggestions will make your Pumpkin Cream Cheese Muffins even more versatile and fun to customize! If you’re looking for more pumpkin delights, check out Pumpkin Cheesecake Truffles or our delicious Pumpkin Cream Cheese for further inspiration. Enjoy your baking adventure!
How to Store and Freeze Pumpkin Cream Cheese Muffins
Room Temperature: Store your Pumpkin Cream Cheese Muffins at room temperature for up to 1 day in an airtight container to maintain their moistness.
Fridge: Keep the muffins in the refrigerator for up to 1 week; place them in an airtight container to prevent them from drying out.
Freezer: Freeze muffins for up to 3 months in a freezer-safe bag or airtight container. Thaw overnight in the fridge before enjoying.
Reheating: When ready to eat, reheat briefly in the microwave for 15-20 seconds, or warm them in the oven at 350°F (175°C) for about 5-7 minutes for that fresh-baked taste!

Pumpkin Cream Cheese Muffins Recipe FAQs
What type of pumpkin puree should I use?
Absolutely! I recommend using canned pumpkin puree for consistency in moisture and flavor. While homemade pumpkin puree can be delicious, it often varies in moisture content, which could affect the muffin’s texture.
How long can I store leftover muffins?
You can store your Pumpkin Cream Cheese Muffins at room temperature for up to 1 day in an airtight container. If you want to keep them longer, refrigerate them for up to a week. Just remember to seal them well to keep their moisture intact!
Can I freeze these muffins? How?
Yes, you can freeze your muffins for up to 3 months! Allow them to cool completely, then place them in a freezer-safe bag or airtight container. To thaw, simply place them in the fridge overnight, or pop them in the microwave for a quick warm-up for about 15-20 seconds.
What if my muffins sink in the middle?
If your Pumpkin Cream Cheese Muffins sink, it often means they were overmixed, leading to dense texture and improper leavening. To prevent this, mix the wet and dry ingredients until just combined, and make sure your baking powder and soda are fresh for proper rising!
Are these muffins suitable for people with dairy allergies?
For a dairy-free version, you can substitute the cream cheese with a dairy-free cream cheese alternative and use plant-based milk in the batter. Just ensure that all your other ingredients are dairy-free to accommodate anyone with allergies.
Can I use different spices besides pumpkin pie spice and cinnamon?
Very! You can experiment with your favorite spices. For example, try nutmeg or allspice for a different flavor profile, or even a pinch of cardamom to add an extra layer of warmth. Just keep the proportions balanced to maintain that cozy fall flavor in your Pumpkin Cream Cheese Muffins!

Pumpkin Cream Cheese Muffins That Will Brighten Your Day
Ingredients
Equipment
Method
- Preheat your oven to 425°F (220°C) and line a muffin pan with paper liners.
- In a large mixing bowl, combine pumpkin puree, light brown sugar, and granulated sugar until smooth.
- Add in room-temperature eggs, sunflower oil, and vanilla extract, stirring until fully incorporated.
- In a separate bowl, whisk together flour, pumpkin pie spice, cinnamon, baking powder, baking soda, and salt.
- Gently fold the dry ingredients into the wet mixture and add whole milk until just combined.
- Let the batter rest for about 30 minutes.
- In a medium bowl, beat together softened cream cheese, granulated sugar, flour, vanilla extract, and whole milk until smooth.
- Scoop pumpkin batter into muffin liners until two-thirds full and add a dollop of cream cheese filling on top.
- Bake at 425°F (220°C) for 5 minutes, then reduce to 350°F (175°C) and bake for another 12-15 minutes.
- Let muffins cool in the pan for 5 minutes, then transfer to a wire rack to cool completely.

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